Ticket #1423 (closed defect: invalid)
Error running: easy_install numpy
| Reported by: | rjain | Owned by: | somebody |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Other | Version: | |
| Keywords: | Cc: |
Description
(demoenv)jain@jain-desktop:/sandbox/demoenv$ easy_install numpy Searching for numpy Reading http://pypi.python.org/simple/numpy/ Reading http://numpy.scipy.org Reading http://sourceforge.net/project/showfiles.php?group_id=1369&package_id=175103 Reading http://numeric.scipy.org Best match: numpy 1.3.0 Downloading http://sourceforge.net/projects/numpy/files/NumPy/1.3.0/numpy-1.3.0.zip/download Processing download Running numpy-1.3.0/setup.py -q bdist_egg --dist-dir /tmp/easy_install-zpQwWp/numpy-1.3.0/egg-dist-tmp-mmTb5S Running from numpy source directory. non-existing path in 'numpy/distutils': 'site.cfg' /tmp/easy_install-zpQwWp/numpy-1.3.0/numpy/distutils/command/config.py:361: DeprecationWarning?: +++++++++++++++++++++++++++++++++++++++++++++++++ Usage of get_output is deprecated: please do not use it anymore, and avoid configuration checks involving running executable on the target machine. +++++++++++++++++++++++++++++++++++++++++++++++++
Found executable /usr/bin/g77 gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */ void ATL_buildinfo(void); int main(void) {
ATL_buildinfo(); return 0;
} /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_st_write_done' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_transfer_integer' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_stop_numeric' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_st_write' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_transfer_character' collect2: ld returned 1 exit status /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_st_write_done' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_transfer_integer' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_stop_numeric' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_st_write' /usr/lib/gcc/x86_64-linux-gnu/4.2.4/../../../../lib/libf77blas.so: undefined reference to `_gfortran_transfer_character' collect2: ld returned 1 exit status gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */ void ATL_buildinfo(void); int main(void) {
ATL_buildinfo(); return 0;
} ATLAS version 3.6.0 built by root on Thu Jun 3 21:13:07 UTC 2004:
UNAME : Linux ravel 2.6.5 #3 SMP Tue Apr 13 13:41:54 UTC 2004 x86_64 GNU/Linux INSTFLG : MMDEF : /home/camm/atlas3-3.6.0/CONFIG/ARCHS/HAMMER64SSE2/gcc/gemm ARCHDEF : /home/camm/atlas3-3.6.0/CONFIG/ARCHS/HAMMER64SSE2/gcc/misc F2CDEFS : -DAdd -DStringSunStyle CACHEEDGE: 720896 F77 : /home/camm/usr/bin/g77, version GNU Fortran (GCC) 3.3.3 (Debian 20040422) F77FLAGS : -fomit-frame-pointer -O -m64 CC : /usr/bin/gcc, version gcc (GCC) 3.3.3 (Debian 20040422) CC FLAGS : -fomit-frame-pointer -O -mfpmath=387 -m64 MCC : /usr/bin/gcc, version gcc (GCC) 3.3.3 (Debian 20040422) MCCFLAGS : -fomit-frame-pointer -O -mfpmath=387 -m64
gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:5: error: size of array ‘test_array’ is negative _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:5: error: size of array ‘test_array’ is negative _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:5: error: size of array ‘test_array’ is negative _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:5: error: size of array ‘test_array’ is negative _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:7: error: size of array ‘test_array’ is negative _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c: In function ‘main’: _configtest.c:7: error: size of array ‘test_array’ is negative _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:5: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:4: warning: function declaration isn’t a prototype _configtest.c:5: warning: function declaration isn’t a prototype /tmp/easy_install-zpQwWp/numpy-1.3.0/numpy/distutils/command/config.py:39: DeprecationWarning?: +++++++++++++++++++++++++++++++++++++++++++++++++ Usage of try_run is deprecated: please do not use it anymore, and avoid configuration checks involving running executable on the target machine. +++++++++++++++++++++++++++++++++++++++++++++++++
_configtest.o: In function `main': /tmp/easy_install-zpQwWp/numpy-1.3.0/_configtest.c:5: undefined reference to `exp' collect2: ld returned 1 exit status _configtest.o: In function `main': /tmp/easy_install-zpQwWp/numpy-1.3.0/_configtest.c:5: undefined reference to `exp' collect2: ld returned 1 exit status _configtest.c:1: warning: conflicting types for built-in function ‘asin’ _configtest.c:2: warning: conflicting types for built-in function ‘cos’ _configtest.c:3: warning: conflicting types for built-in function ‘log’ _configtest.c:4: warning: conflicting types for built-in function ‘fabs’ _configtest.c:5: warning: conflicting types for built-in function ‘tanh’ _configtest.c:6: warning: conflicting types for built-in function ‘atan’ _configtest.c:7: warning: conflicting types for built-in function ‘acos’ _configtest.c:8: warning: conflicting types for built-in function ‘floor’ _configtest.c:9: warning: conflicting types for built-in function ‘fmod’ _configtest.c:10: warning: conflicting types for built-in function ‘sqrt’ _configtest.c:11: warning: conflicting types for built-in function ‘cosh’ _configtest.c:12: warning: conflicting types for built-in function ‘modf’ _configtest.c:13: warning: conflicting types for built-in function ‘sinh’ _configtest.c:14: warning: conflicting types for built-in function ‘frexp’ _configtest.c:15: warning: conflicting types for built-in function ‘exp’ _configtest.c:16: warning: conflicting types for built-in function ‘tan’ _configtest.c:17: warning: conflicting types for built-in function ‘ceil’ _configtest.c:18: warning: conflicting types for built-in function ‘log10’ _configtest.c:19: warning: conflicting types for built-in function ‘sin’ _configtest.c:20: warning: conflicting types for built-in function ‘ldexp’ _configtest.c:1: warning: conflicting types for built-in function ‘expm1’ _configtest.c:2: warning: conflicting types for built-in function ‘log2’ _configtest.c:3: warning: conflicting types for built-in function ‘rint’ _configtest.c:4: warning: conflicting types for built-in function ‘atanh’ _configtest.c:5: warning: conflicting types for built-in function ‘asinh’ _configtest.c:6: warning: conflicting types for built-in function ‘acosh’ _configtest.c:7: warning: conflicting types for built-in function ‘exp2’ _configtest.c:8: warning: conflicting types for built-in function ‘log1p’ _configtest.c:9: warning: conflicting types for built-in function ‘trunc’ _configtest.c:1: warning: conflicting types for built-in function ‘cosf’ _configtest.c:2: warning: conflicting types for built-in function ‘coshf’ _configtest.c:3: warning: conflicting types for built-in function ‘rintf’ _configtest.c:4: warning: conflicting types for built-in function ‘fabsf’ _configtest.c:5: warning: conflicting types for built-in function ‘floorf’ _configtest.c:6: warning: conflicting types for built-in function ‘tanhf’ _configtest.c:7: warning: conflicting types for built-in function ‘log10f’ _configtest.c:8: warning: conflicting types for built-in function ‘logf’ _configtest.c:9: warning: conflicting types for built-in function ‘sinhf’ _configtest.c:10: warning: conflicting types for built-in function ‘acosf’ _configtest.c:11: warning: conflicting types for built-in function ‘sqrtf’ _configtest.c:12: warning: conflicting types for built-in function ‘ldexpf’ _configtest.c:13: warning: conflicting types for built-in function ‘hypotf’ _configtest.c:14: warning: conflicting types for built-in function ‘log2f’ _configtest.c:15: warning: conflicting types for built-in function ‘exp2f’ _configtest.c:16: warning: conflicting types for built-in function ‘atanf’ _configtest.c:17: warning: conflicting types for built-in function ‘fmodf’ _configtest.c:18: warning: conflicting types for built-in function ‘atan2f’ _configtest.c:19: warning: conflicting types for built-in function ‘modff’ _configtest.c:20: warning: conflicting types for built-in function ‘ceilf’ _configtest.c:21: warning: conflicting types for built-in function ‘log1pf’ _configtest.c:22: warning: conflicting types for built-in function ‘asinf’ _configtest.c:23: warning: conflicting types for built-in function ‘acoshf’ _configtest.c:24: warning: conflicting types for built-in function ‘sinf’ _configtest.c:25: warning: conflicting types for built-in function ‘tanf’ _configtest.c:26: warning: conflicting types for built-in function ‘atanhf’ _configtest.c:27: warning: conflicting types for built-in function ‘truncf’ _configtest.c:28: warning: conflicting types for built-in function ‘asinhf’ _configtest.c:29: warning: conflicting types for built-in function ‘frexpf’ _configtest.c:30: warning: conflicting types for built-in function ‘powf’ _configtest.c:31: warning: conflicting types for built-in function ‘expf’ _configtest.c:32: warning: conflicting types for built-in function ‘expm1f’ _configtest.c:1: warning: conflicting types for built-in function ‘tanhl’ _configtest.c:2: warning: conflicting types for built-in function ‘log10l’ _configtest.c:3: warning: conflicting types for built-in function ‘coshl’ _configtest.c:4: warning: conflicting types for built-in function ‘cosl’ _configtest.c:5: warning: conflicting types for built-in function ‘floorl’ _configtest.c:6: warning: conflicting types for built-in function ‘rintl’ _configtest.c:7: warning: conflicting types for built-in function ‘fabsl’ _configtest.c:8: warning: conflicting types for built-in function ‘acosl’ _configtest.c:9: warning: conflicting types for built-in function ‘ldexpl’ _configtest.c:10: warning: conflicting types for built-in function ‘sqrtl’ _configtest.c:11: warning: conflicting types for built-in function ‘logl’ _configtest.c:12: warning: conflicting types for built-in function ‘expm1l’ _configtest.c:13: warning: conflicting types for built-in function ‘hypotl’ _configtest.c:14: warning: conflicting types for built-in function ‘log2l’ _configtest.c:15: warning: conflicting types for built-in function ‘exp2l’ _configtest.c:16: warning: conflicting types for built-in function ‘atanl’ _configtest.c:17: warning: conflicting types for built-in function ‘frexpl’ _configtest.c:18: warning: conflicting types for built-in function ‘atan2l’ _configtest.c:19: warning: conflicting types for built-in function ‘sinhl’ _configtest.c:20: warning: conflicting types for built-in function ‘fmodl’ _configtest.c:21: warning: conflicting types for built-in function ‘log1pl’ _configtest.c:22: warning: conflicting types for built-in function ‘asinl’ _configtest.c:23: warning: conflicting types for built-in function ‘ceill’ _configtest.c:24: warning: conflicting types for built-in function ‘sinl’ _configtest.c:25: warning: conflicting types for built-in function ‘acoshl’ _configtest.c:26: warning: conflicting types for built-in function ‘atanhl’ _configtest.c:27: warning: conflicting types for built-in function ‘tanl’ _configtest.c:28: warning: conflicting types for built-in function ‘truncl’ _configtest.c:29: warning: conflicting types for built-in function ‘powl’ _configtest.c:30: warning: conflicting types for built-in function ‘expl’ _configtest.c:31: warning: conflicting types for built-in function ‘modfl’ _configtest.c:32: warning: conflicting types for built-in function ‘asinhl’ _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype _configtest.c:6: warning: function declaration isn’t a prototype File: build/src.linux-x86_64-2.5/numpy/core/include/numpy/config.h #define SIZEOF_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_PY_INTPTR_T 8 #define SIZEOF_PY_LONG_LONG 8 #define MATHLIB m #define HAVE_SIN #define HAVE_COS #define HAVE_TAN #define HAVE_SINH #define HAVE_COSH #define HAVE_TANH #define HAVE_FABS #define HAVE_FLOOR #define HAVE_CEIL #define HAVE_SQRT #define HAVE_LOG10 #define HAVE_LOG #define HAVE_EXP #define HAVE_ASIN #define HAVE_ACOS #define HAVE_ATAN #define HAVE_FMOD #define HAVE_MODF #define HAVE_FREXP #define HAVE_LDEXP #define HAVE_EXPM1 #define HAVE_LOG1P #define HAVE_ACOSH #define HAVE_ASINH #define HAVE_ATANH #define HAVE_RINT #define HAVE_TRUNC #define HAVE_EXP2 #define HAVE_LOG2 #define HAVE_SINF #define HAVE_COSF #define HAVE_TANF #define HAVE_SINHF #define HAVE_COSHF #define HAVE_TANHF #define HAVE_FABSF #define HAVE_FLOORF #define HAVE_CEILF #define HAVE_RINTF #define HAVE_TRUNCF #define HAVE_SQRTF #define HAVE_LOG10F #define HAVE_LOGF #define HAVE_LOG1PF #define HAVE_EXPF #define HAVE_EXPM1F #define HAVE_ASINF #define HAVE_ACOSF #define HAVE_ATANF #define HAVE_ASINHF #define HAVE_ACOSHF #define HAVE_ATANHF #define HAVE_HYPOTF #define HAVE_ATAN2F #define HAVE_POWF #define HAVE_FMODF #define HAVE_MODFF #define HAVE_FREXPF #define HAVE_LDEXPF #define HAVE_EXP2F #define HAVE_LOG2F #define HAVE_SINL #define HAVE_COSL #define HAVE_TANL #define HAVE_SINHL #define HAVE_COSHL #define HAVE_TANHL #define HAVE_FABSL #define HAVE_FLOORL #define HAVE_CEILL #define HAVE_RINTL #define HAVE_TRUNCL #define HAVE_SQRTL #define HAVE_LOG10L #define HAVE_LOGL #define HAVE_LOG1PL #define HAVE_EXPL #define HAVE_EXPM1L #define HAVE_ASINL #define HAVE_ACOSL #define HAVE_ATANL #define HAVE_ASINHL #define HAVE_ACOSHL #define HAVE_ATANHL #define HAVE_HYPOTL #define HAVE_ATAN2L #define HAVE_POWL #define HAVE_FMODL #define HAVE_MODFL #define HAVE_FREXPL #define HAVE_LDEXPL #define HAVE_EXP2L #define HAVE_LOG2L #define HAVE_DECL_ISNAN #define HAVE_DECL_ISINF #define HAVE_DECL_SIGNBIT #define HAVE_DECL_ISFINITE #ifndef cplusplus /* #undef inline */ #endif
EOF _configtest.c:5: warning: function declaration isn’t a prototype File: build/src.linux-x86_64-2.5/numpy/core/include/numpy/numpyconfig.h #define NPY_SIZEOF_SHORT 2 #define NPY_SIZEOF_INT 4 #define NPY_SIZEOF_LONG 8 #define NPY_SIZEOF_FLOAT 4 #define NPY_SIZEOF_DOUBLE 8 #define NPY_SIZEOF_LONGDOUBLE 16 #define NPY_SIZEOF_PY_INTPTR_T 8 #define NPY_SIZEOF_PY_LONG_LONG 8 #define NPY_SIZEOF_LONGLONG 8 #define NPY_NO_SMP 0 #define NPY_HAVE_DECL_ISNAN #define NPY_HAVE_DECL_ISINF #define NPY_HAVE_DECL_SIGNBIT #define NPY_HAVE_DECL_ISFINITE #define NPY_USE_C99_FORMATS 1 #define NPY_INLINE inline
#ifndef STDC_FORMAT_MACROS #define STDC_FORMAT_MACROS 1 #endif
EOF gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found gnu: no Fortran 90 compiler found zip_safe flag not set; analyzing archive contents... numpy._import_tools: module references file numpy._import_tools: module references path numpy.version: module references file numpy.core.scons_support: module references file numpy.core.setup: module references file numpy.core.generate_numpy_api: module references file numpy.doc.init: module references file numpy.ma.core: module MAY be using inspect.trace numpy.numarray.util: module references file numpy.distutils.system_info: module references file numpy.distutils.exec_command: module references file numpy.distutils.misc_util: module references file numpy.distutils.fcompiler.compaq: module references file numpy.distutils.fcompiler.init: module references file numpy.distutils.command.build_src: module references file numpy.distutils.command.scons: module references file numpy.lib.utils: module references file numpy.lib.utils: module references path numpy.lib.utils: module MAY be using inspect.getsource numpy.lib.utils: module MAY be using inspect.getsourcefile numpy.testing.numpytest: module references file numpy.testing.utils: module references file numpy.testing.noseclasses: module references file numpy.testing.nosetester: module references file numpy.f2py.setup: module references file numpy.f2py.f2py2e: module references file numpy.f2py.setupscons: module references file numpy.f2py.diagnose: module references file Adding numpy 1.3.0 to easy-install.pth file Installing f2py script to /sandbox/demoenv/bin
Installed /sandbox/demoenv/lib/python2.5/site-packages/numpy-1.3.0-py2.5-linux-x86_64.egg Processing dependencies for numpy Finished processing dependencies for numpy Error in atexit._run_exitfuncs: Traceback (most recent call last):
File "/usr/lib/python2.5/atexit.py", line 24, in _run_exitfuncs
func(*targs, **kargs)
File "/tmp/easy_install-zpQwWp/numpy-1.3.0/numpy/distutils/misc_util.py", line 219, in clean_up_temporary_directory
SystemError?: Parent module 'numpy.distutils' not loaded Error in sys.exitfunc: Traceback (most recent call last):
File "/usr/lib/python2.5/atexit.py", line 24, in _run_exitfuncs
func(*targs, **kargs)
File "/tmp/easy_install-zpQwWp/numpy-1.3.0/numpy/distutils/misc_util.py", line 219, in clean_up_temporary_directory
SystemError?: Parent module 'numpy.distutils' not loaded
