Timeline


and .

05/16/12: Today

11:24 Commit [c6adf0a0] by Denis Laxalde
[master] FIX: drop spurious full_output in slsqp __main__

05/15/12: Yesterday

14:26 Commit [98c46c92] by Denis Laxalde
[master] Merge pull request #196 from dlaxalde:enh/optimize/simplify-minimize
14:20 Commit [b4806174] by Denis Laxalde
[master] DOC: update optimize tutorial w.r.t. changes in minimize/minimize_scalar signature
14:20 Commit [89e248f6] by Denis Laxalde
[master] DOC: update minimize and minimize_scalar docstring and examples wrt new result format
13:02 Commit [9cc3d374] by Denis Laxalde
[master] ENH: define and use Result to store results of optimization wrappers
13:02 Commit [1f921567] by Denis Laxalde
[master] FIX: don't use {} as default value for options parameter in optimize
04:01 Ticket #1660 (Precision of scipy.ndimage.gaussian_filter*() limited) created by roderikk
Today I noticed that in the source of scipy.ndimage.gaussian_filter1d it …

05/14/12:

14:41 Commit [de271710] by Ralf Gommers
[master] Merge pull request #209 from stefanv/doc_global_imports
14:37 Ticket #1656 (namespace cleaned up too much in 0.10 -- factorial is missing) closed by rgommers
fixed: PR merged, thanks Stefan.
14:22 Commit [323b18c0] by Ralf Gommers
[master] Merge pull request #213 from dlaxalde/doc/min-numpy-version
11:18 Ticket #1657 (fmin_slsqp ieqcons parameter broken) closed by dlaxalde
fixed
09:47 Commit [25817d4c] by Denis Laxalde
[master] DOC: raise minimum NumPy version to 1.5.0
09:06 Commit [9923353f] by Denis Laxalde
[master] BUG: use approx_jacobian instead of approx_fprime in SLSQP
09:06 Commit [41c2d66e] by Denis Laxalde
[master] BUG: handle constraint functions returning a scalar in slsqp
09:06 Commit [01876737] by Denis Laxalde
[master] TST: test for SLSQP with a scalar constraint function

05/11/12:

16:13 Ticket #1638 (cephes_smirnov nan-to-int conversion bug) closed by pv
fixed: Fixed in commit:3418836f832
16:13 Commit [2858f452] by Pauli Virtanen
[master] BUG: special: nan safety in smirnovi & kolmogi
16:13 Commit [f7083b60] by Stefan van der Walt [Pauli Virtanen]
[master] TST: stats: Add regression test for ticket 1638.
16:09 Commit [3418836f] by Yaroslav Halchenko [Pauli Virtanen]
[master] BUG: special/smirnov -- make comparison robust to handle NaNs
15:47 Commit [666b89a8] by Pauli Virtanen
[master] ENH: linalg/expm: merge expm() algorithm improvement
15:46 Commit [cbebb758] by Pauli Virtanen
[master] TST: linalg/expm: clean up the expm tests a bit, and ensure they cover all branches
15:36 Commit [bf86910a] by Pauli Virtanen
[master] linalg: update expm citation
15:33 Commit [bc359b1b] by Pauli Virtanen
[master] DOC: update THANKS.txt
15:31 Commit [9d288b28] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs.py: improved expm-logm consistency test
15:31 Commit [92bdd5d6] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs.py: typo
15:31 Commit [426a2005] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs.py: use identity instead of eye like other tests do
15:31 Commit [4523b37b] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs.py: expm-logm consistency test
15:31 Commit [6ab8af59] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs: typo
15:31 Commit [4194ee99] by Robert Gantner [Pauli Virtanen]
[master] matfuncs.py: style issues
15:31 Commit [cb216659] by Robert Gantner [Pauli Virtanen]
[master] test_matfuncs: expm test for different branches used in Pade approximation
15:31 Commit [3533e544] by Robert Gantner [Pauli Virtanen]
[master] expm rewrite; requires less matrix multiplications and chooses optimal order q
15:25 Commit [39294b7a] by Pauli Virtanen
[master] DOC: improve appearance of PDF output
15:25 Commit [b578b4d8] by Pauli Virtanen
[master] GEN: regenerate Cython output
14:33 Commit [540716a3] by Pauli Virtanen
[master] DOC: add function signatures to all Cython-based routine docstrings (they cannot be introspected)

05/10/12:

16:30 Ticket #1659 (Function scipy.stats.poisson.fit Is Missing) created by MrDrMcNinja
I am aware that there is another ticket related to this topic which was …
15:08 Ticket #1658 (scipy.stats.kendalltau returns 1 instead of (1, p) "for all ties in both ...) created by ffinkernagel
>>> scipy.stats.kendalltau([0, 1, 0], [0, 0, 1]) (-0.5, …
09:42 Ticket #1657 (fmin_slsqp ieqcons parameter broken) created by pv
It seems the ieqcons parameter in fmin_slsqp is broken: […] This …

05/09/12:

17:58 Commit [f894fa85] by Stefan van der Walt
[master] DOC: Remove mention of global imports in main package docstring.
07:20 Commit [8cec7190] by lmwang [Denis Laxalde]
[master] BUG: fix constraint jacobian retrieval in slsqp

05/08/12:

08:09 Ticket #1656 (namespace cleaned up too much in 0.10 -- factorial is missing) created by yarikoptic
Just got a FTBFS bug report in Debian due to scipy.factorial being absent …

05/07/12:

22:04 Commit [005cdcfc] by Stefan van der Walt
[master] Merge pull request #203 from jjhelmus/ticket-954-fix
22:01 Ticket #954 (ndimage.distance_transform_edt(False) Crashes) closed by stefan
fixed
11:53 Commit [c6e7ea33] by Jonathan Helmus
[master] added unit test for ticket #954
10:57 Commit [6a2d8950] by Ralf Gommers
[master] Merge pull request #119 from jakevdp/sparse-graph

05/06/12:

23:11 Commit [0c111e98] by Jake Vanderplas
[master] add test for masked input
09:50 Commit [fd849cd0] by Jake Vanderplas
[master] add definite test cases

05/05/12:

10:06 Commit [92f62aa7] by Ralf Gommers
[master] Merge pull request #188 from rgommers/ticket-1614-norm-logcdf
10:04 Ticket #1614 (logcdf function of normal distribution (scipy.stats) can not handle a wide ...) closed by rgommers
fixed: PR 188 is now merged. Thanks for your contribution Andrew.

05/04/12:

18:46 Ticket #1655 (Docs for var, std, stderr, samplevar, samplestd have wrong divisor) closed by pv
wontfix: I think this is a wontfix -- there won't be a new 0.7.x release, and …
16:41 Ticket #1655 (Docs for var, std, stderr, samplevar, samplestd have wrong divisor) created by erg
The sample (unbiased) calculation for variance uses 1/(N-1), where N is …
11:13 Commit [fe23cf61] by Jonathan Helmus
[master] FIX: ndimage.distance_transform_edt ticket #954

05/03/12:

15:11 Ticket #1518 (ndimage.label gives incorrect labeled components) closed by stefan
invalid: You're right! And since we have connected components in skimage already, …

05/02/12:

22:11 Ticket #1654 (coo.todense() segfaults) closed by stefan
worksforme: With 0.11.0.dev I get a MemoryError? instead. It looks like the row and …
20:34 Ticket #1654 (coo.todense() segfaults) created by rlm
Zipped pickle (~7MB) of a COO matrix can be found here: …
14:17 Ticket #1653 (scoreatprecentile return wrong values when used on array with NaNs) created by imrisofer
the output of scoreatprecentile changed according to the number of …

04/30/12:

10:53 Ticket #1652 (scipy.cluster.hierarchy.ClusterNode.pre_order returns IndexError for ...) created by MarkPundurs
To reproduce the error, run the following script: […] The result is: …
08:56 Commit [f14e0fee] by Denis Laxalde
[master] FIX: optimize: improve if clause in MemoizeJac

04/27/12:

01:20 Ticket #1576 (Attempt to access func_name attribute in fsolve in python 3) closed by rgommers
fixed: PR merged.
01:19 Ticket #1632 (Incorrect application of nonzero() to ndarry object.) closed by rgommers
fixed: PR merged.
01:18 Ticket #1528 (fix some build warnings for obs) closed by rgommers
fixed: All patches merged with https://github.com/scipy/scipy/pull/194. Thanks a …
01:15 Commit [75409c28] by Ralf Gommers
[master] Merge pull request #194 from rgommers/collection-of-fixes
01:13 Ticket #1385 (Python 3.2 "ResourceWarning: unclosed file" during scipy.test()) closed by rgommers
fixed: PR merged, all good now.

04/26/12:

14:24 Ticket #1651 (scipy.stats: unclear doc string) created by nicky
The doc string […] (see the line …
14:17 Ticket #1650 (scipy.stats: inconsistent doc string) created by nicky
The doc string on line (as of date April 16 2012) …
14:02 Ticket #1649 (ndimage convolution with large mask uses too much memory) created by stefan
To reproduce: […]
12:34 Commit [242106b3] by Ralf Gommers
[master] STY: simplify opening data files in cluster tests.

04/25/12:

15:56 Ticket #1648 (Bug in orthogonal.py: values between 0 and 1 not accepted as "positive".) created by mforbes
Changeset 62fa2c26993613915ffc7a8ae4a2c6cda2fb9232 replaced many …

04/23/12:

05:14 Commit [56971c57] by David Cournapeau
[master] REF: simplify hook scripts using new tweak_builder facility in bento.
05:14 Commit [c093474b] by David Cournapeau
[master] REF: use new tweak API for fftpack.
05:14 Commit [0f335f70] by David Cournapeau
[master] BUG: add missing CLIB use for interpolate extensions.

04/22/12:

16:07 Commit [8be148e8] by Ralf Gommers
[master] MAINT: fix more Sphinx warnings.
13:59 Commit [e98c18ed] by Ralf Gommers
[master] MAINT: fix more Sphinx issues. Also closes #1643.
13:59 Commit [a36f106d] by Ralf Gommers
[master] MAINT: fix more Sphinx issues.
13:59 Commit [1e86a056] by Ralf Gommers
[master] DOC: fix more Sphinx issues.
13:59 Commit [0d063838] by Ralf Gommers
[master] DOC: fix more Sphinx issues.
13:59 Commit [878dd58f] by Ralf Gommers
[master] DOC: fix more Sphinx warnings.
13:59 Commit [5c4c8ea8] by Ralf Gommers
[master] DOC: fix more Sphinx issues. Also complete fftpack.tilbert docstring.
13:59 Commit [87c9baaf] by Ralf Gommers
[master] MAINT: fix some Sphinx warnings.
13:59 Ticket #1643 (DOC doesn't render correctly in scipy.stats.gaussian_kde) closed by rgommers
fixed: Fixed in commit:e98c18e There were two issues. One was that …
13:02 Commit [51755f2f] by David Cournapeau
[master] REF: move f2py into bento itself.
08:24 Ticket #1647 (BUG: stats: _argcheck function for the erlang distribution is misnamed.) created by warren.weckesser
The erlang distribution (in distributions.py) defines the method …

04/20/12:

03:59 Commit [9ba109e2] by David Cournapeau
[master] ENH: add ndimage to bento build.
03:59 Commit [5a287225] by David Cournapeau
[master] ENH: add harwell_boeing to bento build.
03:59 Commit [bb358eef] by David Cournapeau
[master] ENH: adding odr and weave to bento build.
03:59 Commit [ba32d239] by David Cournapeau
[master] BUG: add CLIB use where necessary.
03:59 Commit [de4d4b3e] by David Cournapeau
[master] REF: remove obsolete workarounds in bscript.
03:59 Commit [16000440] by David Cournapeau
[master] ENH: use new backend feature of bento.
03:49 Ticket #1646 (Could not find file error from setup.py build) created by bdpy
Running python setup.py build from latest github repository produces: …

04/19/12:

14:52 Ticket #1645 (incorrect lwork assertion in f2py wrapper for LAPACK xGERQF) created by mike.wimmer
I noticed that the f2py wrapper for xGERQF has a wrong assertion with …

04/18/12:

09:34 Commit [4208897b] by Denis Laxalde
[master] ENH: move the retall parameter as an option in minimize
09:16 Commit [54ee3ad0] by Denis Laxalde
[master] ENH: drop full_output parameter from minimize_scalar
08:56 Commit [4aa309e0] by Denis Laxalde
[master] ENH: drop full_output parameter from minimize

04/17/12:

15:17 Commit [dc3a6f6a] by Ralf Gommers
[master] STY: fix odd use of array.nonzero(). Closes #1632.
15:02 Ticket #1644 (scipy.optimize.fmin_bfgs not handling functions with boundaries that go ...) created by jsalvatier
Here's the toy problem I've set up: […] The solver returns [nan] as …
09:28 Ticket #1643 (DOC doesn't render correctly in scipy.stats.gaussian_kde) created by andreash
the example in the docstring of scipy.stats.gaussian_kde doesn't render …

04/16/12:

13:02 Commit [094adeb5] by Ralf Gommers
[master] BUG: fix compilation with g77.
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